A Computational Approach for Predicting Role of Human MicroRNAs in MERS-CoV Genome
Identifieur interne : 001D67 ( Main/Exploration ); précédent : 001D66; suivant : 001D68A Computational Approach for Predicting Role of Human MicroRNAs in MERS-CoV Genome
Auteurs : Md Mahmudul Hasan [États-Unis] ; Rozina Akter [États-Unis] ; Md. Shahin Ullah [Bangladesh] ; Md. Jaynul Abedin [Bangladesh] ; G. M. Ahsan Ullah [Bangladesh] ; Md. Zakir Hossain [États-Unis]Source :
- Advances in Bioinformatics [ 1687-8027 ] ; 2014.
Abstract
The new epidemic Middle East Respiratory Syndrome (MERS) is caused by a type of human coronavirus called MERS-CoV which has global fatality rate of about 30%. We are investigating potential antiviral therapeutics against MERS-CoV by using host microRNAs (miRNAs) which may downregulate viral gene expression to quell viral replication. We computationally predicted potential 13 cellular miRNAs from 11 potential hairpin sequences of MERS-CoV genome. Our study provided an interesting hypothesis that those miRNAs, that is, hsa-miR-628-5p, hsa-miR-6804-3p, hsa-miR-4289, hsa-miR-208a-3p, hsa-miR-510-3p, hsa-miR-18a-3p, hsa-miR-329-3p, hsa-miR-548ax, hsa-miR-3934-5p, hsa-miR-4474-5p, hsa-miR-7974, hsa-miR-6865-5p, and hsa-miR-342-3p, would be antiviral therapeutics against MERS-CoV infection.
Url:
DOI: 10.1155/2014/967946
PubMed: 25610462
PubMed Central: 4283225
Affiliations:
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Shahin" last="Ullah">Md. Shahin Ullah</name><affiliation wicri:level="1"><nlm:aff id="I3">Biotechnology and Genetic Engineering Discipline, Khulna University, Khulna 9208, Bangladesh</nlm:aff><country xml:lang="fr">Bangladesh</country><wicri:regionArea>Biotechnology and Genetic Engineering Discipline, Khulna University, Khulna 9208</wicri:regionArea><wicri:noRegion>Khulna 9208</wicri:noRegion></affiliation></author><author><name sortKey="Abedin, Md Jaynul" sort="Abedin, Md Jaynul" uniqKey="Abedin M" first="Md. Jaynul" last="Abedin">Md. Jaynul Abedin</name><affiliation wicri:level="1"><nlm:aff id="I4">Civil Engineering Department, Bangladesh University of Engineering and Technology, Dhaka 1000, Bangladesh</nlm:aff><country xml:lang="fr">Bangladesh</country><wicri:regionArea>Civil Engineering Department, Bangladesh University of Engineering and Technology, Dhaka 1000</wicri:regionArea><wicri:noRegion>Dhaka 1000</wicri:noRegion></affiliation></author><author><name sortKey="Ullah, G M Ahsan" sort="Ullah, G M Ahsan" uniqKey="Ullah G" first="G. M. Ahsan" last="Ullah">G. M. Ahsan Ullah</name><affiliation wicri:level="1"><nlm:aff id="I5">Environment Science Discipline, Khulna University, Khulna 9208, Bangladesh</nlm:aff><country xml:lang="fr">Bangladesh</country><wicri:regionArea>Environment Science Discipline, Khulna University, Khulna 9208</wicri:regionArea><wicri:noRegion>Khulna 9208</wicri:noRegion></affiliation></author><author><name sortKey="Hossain, Md Zakir" sort="Hossain, Md Zakir" uniqKey="Hossain M" first="Md. Zakir" last="Hossain">Md. Zakir Hossain</name><affiliation wicri:level="2"><nlm:aff id="I2">BioMedNanoTech, Inc., 500 South University Avenue Suite 319, Little Rock, AR 72205, USA</nlm:aff><country xml:lang="fr">États-Unis</country><wicri:regionArea>BioMedNanoTech, Inc., 500 South University Avenue Suite 319, Little Rock, AR 72205</wicri:regionArea><placeName><region type="state">Arkansas</region></placeName></affiliation></author></analytic><series><title level="j">Advances in Bioinformatics</title><idno type="ISSN">1687-8027</idno><idno type="eISSN">1687-8035</idno><imprint><date when="2014">2014</date></imprint></series></biblStruct></sourceDesc></fileDesc><profileDesc><textClass></textClass></profileDesc></teiHeader><front><div type="abstract" xml:lang="en"><p>The new epidemic Middle East Respiratory Syndrome (MERS) is caused by a type of human coronavirus called MERS-CoV which has global fatality rate of about 30%. We are investigating potential antiviral therapeutics against MERS-CoV by using host microRNAs (miRNAs) which may downregulate viral gene expression to quell viral replication. We computationally predicted potential 13 cellular miRNAs from 11 potential hairpin sequences of MERS-CoV genome. Our study provided an interesting hypothesis that those miRNAs, that is, hsa-miR-628-5p, hsa-miR-6804-3p, hsa-miR-4289, hsa-miR-208a-3p, hsa-miR-510-3p, hsa-miR-18a-3p, hsa-miR-329-3p, hsa-miR-548ax, hsa-miR-3934-5p, hsa-miR-4474-5p, hsa-miR-7974, hsa-miR-6865-5p, and hsa-miR-342-3p, would be antiviral therapeutics against MERS-CoV infection.</p></div></front><back><div1 type="bibliography"><listBibl><biblStruct><analytic><author><name sortKey="Lin, M H" uniqKey="Lin M">M. H. Lin</name></author><author><name sortKey="Chuang, S J" uniqKey="Chuang S">S. J. Chuang</name></author><author><name sortKey="Chen, C C" uniqKey="Chen C">C. C. 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Montag</name></author><author><name sortKey="Hitt, R" uniqKey="Hitt R">R. Hitt</name></author><author><name sortKey="Opitz, L" uniqKey="Opitz L">L. Opitz</name></author><author><name sortKey="Schulz Schaeffer, W J" uniqKey="Schulz Schaeffer W">W. J. Schulz-Schaeffer</name></author><author><name sortKey="Hunsmann, G" uniqKey="Hunsmann G">G. Hunsmann</name></author><author><name sortKey="Motzkus, D" uniqKey="Motzkus D">D. Motzkus</name></author></analytic></biblStruct></listBibl></div1></back></TEI><affiliations><list><country><li>Bangladesh</li><li>États-Unis</li></country><region><li>Arkansas</li><li>Texas</li></region></list><tree><country name="États-Unis"><region name="Texas"><name sortKey="Hasan, Md Mahmudul" sort="Hasan, Md Mahmudul" uniqKey="Hasan M" first="Md Mahmudul" last="Hasan">Md Mahmudul Hasan</name></region><name sortKey="Akter, Rozina" sort="Akter, Rozina" uniqKey="Akter R" first="Rozina" last="Akter">Rozina Akter</name><name sortKey="Hossain, Md Zakir" sort="Hossain, Md Zakir" uniqKey="Hossain M" first="Md. Zakir" last="Hossain">Md. Zakir Hossain</name></country><country name="Bangladesh"><noRegion><name sortKey="Ullah, Md Shahin" sort="Ullah, Md Shahin" uniqKey="Ullah M" first="Md. Shahin" last="Ullah">Md. Shahin Ullah</name></noRegion><name sortKey="Abedin, Md Jaynul" sort="Abedin, Md Jaynul" uniqKey="Abedin M" first="Md. Jaynul" last="Abedin">Md. Jaynul Abedin</name><name sortKey="Ullah, G M Ahsan" sort="Ullah, G M Ahsan" uniqKey="Ullah G" first="G. M. Ahsan" last="Ullah">G. M. Ahsan Ullah</name></country></tree></affiliations></record>Pour manipuler ce document sous Unix (Dilib)
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